SubtiBank SubtiBank
ylxM [2019-07-01 11:08:04]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

ylxM [2019-07-01 11:08:04]

putative signal recognition particle (SRP) component
Locus
BSU15970
Isoelectric point
4.54
Molecular weight
13.02 kDa
Protein length
110 aa Sequence Blast
Gene length
333 bp Sequence Blast
Function
presecretory protein translocation
Product
putative signal recognition particle (SRP) component
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
Loading

Categories containing this gene/protein

  • Information processing → Protein synthesis, modification and degradation → Protein secretion

    • Gene

    Coordinates
    1,671,828 1,672,160

    The protein

    Protein family

  • UPF0122 family (according to Swiss-Prot)

    • Structure

  • 1XSV (from Staphylococcus aureus, 54% identity)

    • Expression and Regulation

    Operons

    Genes
    ylxM-ffh-rpsP-ylqC-ylqD-rimM-trmD-rplS
    Description
    PubMed

    Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon

    • Regulation

  • the mRNA is processed between ffh and rpsP by RNase Y, this requires the YmcA-YlbF-YaaT complex PubMed
    • view in new tab

    Biological materials

    Mutant

  • BKE15970 (ylxM::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTTGAGCTCTCCCCTTTG, downstream forward: _UP4_AAATTAGATTAGGAGGCGGC
  • BKK15970 (ylxM::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTTGAGCTCTCCCCTTTG, downstream forward: _UP4_AAATTAGATTAGGAGGCGGC

    • References

    Loading